BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033H09LP1|AL429821
(865 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig240 1643 0.0
>3x_Contig240
Length = 1244
Score = 1643 bits (829), Expect = 0.0
Identities = 845/849 (99%), Gaps = 1/849 (0%)
Strand = Plus / Plus
Query: 1 gatccagttaagaacatgaaaattgacgacgatgacttcttaaagcttctaaagaagatc 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gatccagtgaagaacatgaaaattgacgacgatgacttcttaaagcttctaaagaagatc 455
Query: 61 gaagtattggaaggaaggttatactcaaacccattgacaaatactgttagattaagagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gaagtattggaaggaaggttatactcaaacccattgacaaatactgttagattaagagag 515
Query: 121 ctttatgagaaatactcaaacaaggtggccattgaggcagacatcaagaatttgaagcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ctttatgagaaatactcaaacaaggtggccattgaggcagacatcaagaatttgaagcat 575
Query: 181 aaaatcaacgaggcacaagctgtcatccaattagacgatttgcgtcgcaggaagagggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 aaaatcaacgaggcacaagctgtcatccaattagacgatttgcgtcgcaggaagagggtt 635
Query: 241 ttacgtcgtttagggttctgtacacagtccgatatcatagagttgaaggggcgttttgcc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 636 ttacgtcgtttagggttctgtacacagtccgatatcatagagttgaaggggcgtgttgcc 695
Query: 301 tgcgaaatttcctcgggtgatgagttgttattgacagaattaatcttcaatggtaatttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tgcgaaatttcctcgggtgatgagttgttattgacagaattaatcttcaatggtaatttc 755
Query: 361 aacgagttatcccctgctcaagctgctgctcttttatcatgtttcgcattccaagagcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 aacgagttatcccctgctcaagctgctgctcttttatcatgtttcgcattccaagagcgt 815
Query: 421 tgcaaagaggccccaaggttgaagcctgaacttgcgga-ccattgaaagcaatgagagaa 479
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 816 tgcaaagaggccccaaggttgaagcctgaacttgcggagccattgaaagcaatgagagaa 875
Query: 480 gtagcaggtaaaattgctaaaataatcaaagactccaaaattgaattagtcgaaaaagag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 gtagcaggtaaaattgctaaaataatcaaagactccaaaattgaattagtcgaaaaagag 935
Query: 540 tatgttgaaagtttcaggcatgagcttatggaggtggtatatgagttgtgccaaggtgca 599
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 936 tatgttgaaagtttcaggcatgagcttatggaggtggtatatgagtggtgccaaggtgca 995
Query: 600 tcatttactcaaatttgcaaaatgacagatgtttatgaaggttccctcatcagaatgttc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 tcatttactcaaatttgcaaaatgacagatgtttatgaaggttccctcatcagaatgttc 1055
Query: 660 aaaagattagaagagatgatcaaggaactaatcgatgtgtctaaaacaattggtaatgct 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 aaaagattagaagagatgatcaaggaactaatcgatgtgtctaaaacaattggtaatgct 1115
Query: 720 acattaaaggaaaagatggaagcggcattaaacctcattcacagagatattgtctctgct 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1116 acattaaaggaaaagatggaagcggcattaaacctcattcacagagatattgtctctgct 1175
Query: 780 ggctcgttgtatctatgatatatataaagatatgtaacttcatcaaaatctatgtcttat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1176 ggctcgttgtatctatgatatatataaagatatgtaacttcatcaaaatctatgtcttat 1235
Query: 840 agataatca 848
|||||||||
Sbjct: 1236 agataatca 1244
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7079
Number of Sequences: 1807
Number of extensions: 7079
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 865
length of database: 10,358,551
effective HSP length: 16
effective length of query: 849
effective length of database: 10,329,639
effective search space: 8769863511
effective search space used: 8769863511
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)